Genome Details
Selected Rep_genome_ID: CGMR096838
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp947623965
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR096838 | 2,087,955 | 92.15% | 2.04% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR096838_CGC15 | CGCFAM_00001 | Yes | 4 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| CGMR096838_CGC18 | CGCFAM_00017 | Yes | 7 | 2 | fructan |
| CGMR096838_CGC4 | CGCFAM_00260 | Yes | 4 | 1 | |
| CGMR096838_CGC5 | CGCFAM_00306 | Yes | 6 | 4 | |
| CGMR096838_CGC17 | CGCFAM_00355 | Yes | 6 | 1 | |
| CGMR096838_CGC6 | CGCFAM_02118 | Yes | 5 | 1 | |
| CGMR096838_CGC12 | CGCFAM_02825 | Yes | 4 | 1 | |
| CGMR096838_CGC1 | CGCFAM_03162 | Yes | 5 | 2 | |
| CGMR096838_CGC2 | CGCFAM_07378 | Yes | 3 | 1 | |
| CGMR096838_CGC10 | CGCFAM_09172 | Yes | 3 | 2 | |
| CGMR096838_CGC16 | CGCFAM_09173 | Yes | 4 | 1 |
Top CAZyme Families