Genome Details
Selected Rep_genome_ID: CGMR027679
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp959604655
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR027679 | 2,215,027 | 93.25% | 0.48% | China | Asia | CGMR |
| KY168_89 | 2,112,623 | 92.14% | 2.63% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR027679_CGC11 | CGCFAM_00001 | Yes | 5 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| CGMR027679_CGC25 | CGCFAM_00003 | Yes | 7 | 3 | |
| CGMR027679_CGC10 | CGCFAM_00119 | Yes | 5 | 4 | |
| CGMR027679_CGC24 | CGCFAM_00355 | Yes | 3 | 1 | |
| CGMR027679_CGC22 | CGCFAM_00444 | Yes | 4 | 2 | |
| CGMR027679_CGC23 | CGCFAM_00519 | Yes | 3 | 1 | |
| CGMR027679_CGC13 | CGCFAM_00548 | Yes | 8 | 2 | |
| CGMR027679_CGC28 | CGCFAM_01984 | Yes | 3 | 1 | |
| CGMR027679_CGC4 | CGCFAM_02408 | Yes | 6 | 1 | |
| CGMR027679_CGC19 | CGCFAM_02410 | Yes | 3 | 1 | |
| CGMR027679_CGC7 | CGCFAM_03094 | Yes | 8 | 1 | |
| CGMR027679_CGC1 | CGCFAM_05482 | Yes | 3 | 1 | |
| CGMR027679_CGC12 | CGCFAM_08426 | Yes | 8 | 1 | |
| CGMR027679_CGC17 | CGCFAM_08427 | Yes | 4 | 1 |
Top CAZyme Families