Genome Details
Selected Rep_genome_ID: AG361_128
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
UBA3637
Genus
CAAHEQ01
Species
CAAHEQ01 sp900772625
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG361_128 | 1,280,460 | 98.9% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_3334 | 1,260,593 | 97.8% | 0% | India | Asia | HRGM |
| MGYG000002649 | 1,168,434 | 96.52% | 0.1% | United Republic of Tanzania | Africa | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_B_15_RAU0016YZ.233 | 1,231,166 | 97.8% | 0% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG361_128_CGC7 | CGCFAM_00396 | Yes | 4 | 1 | |
| AG361_128_CGC8 | CGCFAM_00472 | Yes | 3 | 2 | |
| AG361_128_CGC2 | CGCFAM_00661 | Yes | 5 | 2 | |
| AG361_128_CGC9 | CGCFAM_01961 | Yes | 4 | 1 | |
| AG361_128_CGC1 | CGCFAM_04700 | Yes | 4 | 1 | |
| AG361_128_CGC6 | CGCFAM_04701 | Yes | 7 | 1 | |
| AG361_128_CGC3 | CGCFAM_07176 | Yes | 4 | 1 | |
| AG361_128_CGC4 | CGCFAM_07177 | Yes | 5 | 1 |
Top CAZyme Families