Genome Details
Selected Rep_genome_ID: AG361_107_sub
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp900556525
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG361_107_sub | 2,784,158 | 97.99% | 0% | NA | Africa | H3AfricaPhase2 |
| GCA_021634045.1_ASM2163404v1_genomic | 2,554,446 | 96.64% | 0.67% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_3040 | 2,652,281 | 97.31% | 0% | United Kingdom | Europe | HRGM |
| MGYG000002661 | 2,289,773 | 90.25% | 1.23% | United Republic of Tanzania | Africa | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_M_24_1194.86 | 2,512,126 | 96.64% | 0% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG361_107_sub_CGC18 | CGCFAM_00717 | Yes | 5 | 1 | |
| AG361_107_sub_CGC2 | CGCFAM_02016 | Yes | 5 | 1 | |
| AG361_107_sub_CGC1 | CGCFAM_07168 | Yes | 5 | 2 | |
| AG361_107_sub_CGC13 | CGCFAM_07169 | Yes | 9 | 1 | |
| AG361_107_sub_CGC14 | CGCFAM_07170 | Yes | 3 | 1 | |
| AG361_107_sub_CGC22 | CGCFAM_07171 | Yes | 6 | 1 | |
| AG361_107_sub_CGC5 | CGCFAM_07172 | Yes | 4 | 1 | |
| AG361_107_sub_CGC8 | CGCFAM_07173 | Yes | 3 | 2 | |
| AG361_107_sub_CGC9 | CGCFAM_07175 | Yes | 8 | 1 |
Top CAZyme Families