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Cluster: YassourM_2018_SRR7280819_bin.1_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme YassourM_2018_SRR7280819_bin.1_k119_6580 YassourM_2018_SRR7280819_bin.1_k119_6580_124 136744 137868 - GH172
pfam YassourM_2018_SRR7280819_bin.1_k119_6580 YassourM_2018_SRR7280819_bin.1_k119_6580_125 137881 138279 - EIIA-man
TC YassourM_2018_SRR7280819_bin.1_k119_6580 YassourM_2018_SRR7280819_bin.1_k119_6580_126 138306 139139 - 4.A.6.1.13
TC YassourM_2018_SRR7280819_bin.1_k119_6580 YassourM_2018_SRR7280819_bin.1_k119_6580_127 139142 139927 - 4.A.6.1.13
TC YassourM_2018_SRR7280819_bin.1_k119_6580 YassourM_2018_SRR7280819_bin.1_k119_6580_128 139937 140410 - 4.A.6.1.18
Gene ID: YassourM_2018_SRR7280819_bin.1_k119_6580_124
Type: CAZyme
Location: 136744 - 137868 (-)
Gene ID: YassourM_2018_SRR7280819_bin.1_k119_6580_125
Type: pfam
Location: 137881 - 138279 (-)
Gene ID: YassourM_2018_SRR7280819_bin.1_k119_6580_126
Type: TC
Location: 138306 - 139139 (-)
Gene ID: YassourM_2018_SRR7280819_bin.1_k119_6580_127
Type: TC
Location: 139142 - 139927 (-)
Gene ID: YassourM_2018_SRR7280819_bin.1_k119_6580_128
Type: TC
Location: 139937 - 140410 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
YassourM_2018_SRR7280819_bin.1_k119_6580_128 vegan > omnivore 1.05226 0.00701

🧭 Explore Read Mapping of CGC

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