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Cluster: WampachL_2018_SRR5575366_bin.4_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme WampachL_2018_SRR5575366_bin.4_k141_968 WampachL_2018_SRR5575366_bin.4_k141_968_128 174519 175985 - GT87
CAZyme WampachL_2018_SRR5575366_bin.4_k141_968 WampachL_2018_SRR5575366_bin.4_k141_968_129 175982 177343 - GT87
pfam WampachL_2018_SRR5575366_bin.4_k141_968 WampachL_2018_SRR5575366_bin.4_k141_968_130 177660 180554 + Cu-oxidase_2 | Cu-oxidase_3 | Cupredoxin_1
pfam WampachL_2018_SRR5575366_bin.4_k141_968 WampachL_2018_SRR5575366_bin.4_k141_968_131 181177 182388 - p450
TC WampachL_2018_SRR5575366_bin.4_k141_968 WampachL_2018_SRR5575366_bin.4_k141_968_132 182636 184081 - 2.A.1.1.53
TC WampachL_2018_SRR5575366_bin.4_k141_968 WampachL_2018_SRR5575366_bin.4_k141_968_133 184307 185308 - 8.A.5.1.6
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_968_128
Type: CAZyme
Location: 174519 - 175985 (-)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_968_129
Type: CAZyme
Location: 175982 - 177343 (-)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_968_130
Type: pfam
Location: 177660 - 180554 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_968_131
Type: pfam
Location: 181177 - 182388 (-)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_968_132
Type: TC
Location: 182636 - 184081 (-)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_968_133
Type: TC
Location: 184307 - 185308 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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