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Cluster: WampachL_2018_SRR5575366_bin.4_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_745 913864 914817 + 2.A.4.1.4
STP WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_746 915073 916473 + STAS
CAZyme WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_747 916724 917614 + CE4
NULL(UNKNOWN) WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_748 917663 917932 + NULL(UNKNOWN)
[View Structural Homologs]
pfam WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_749 918094 918849 - DSBA
CAZyme WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_750 919015 920079 - CE4
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_745
Type: TC
Location: 913864 - 914817 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_746
Type: STP
Location: 915073 - 916473 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_747
Type: CAZyme
Location: 916724 - 917614 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_748
Type:
Location: 917663 - 917932 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_749
Type: pfam
Location: 918094 - 918849 (-)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_750
Type: CAZyme
Location: 919015 - 920079 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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