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Cluster: WampachL_2018_SRR5575366_bin.4_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_560 666723 671264 - 3.A.7.17.1
pfam WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_561 671885 673072 + Amino_oxidase | GLF | NAD_binding_8
CAZyme WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_562 673075 675081 + GT2
pfam WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_563 675078 675959 + ABC2_membrane
TC WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_564 675964 676737 + 3.A.1.103.5
TC WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_565 677195 678457 + 9.A.47.2.1
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_560
Type: TC
Location: 666723 - 671264 (-)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_561
Type: pfam
Location: 671885 - 673072 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_562
Type: CAZyme
Location: 673075 - 675081 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_563
Type: pfam
Location: 675078 - 675959 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_564
Type: TC
Location: 675964 - 676737 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_565
Type: TC
Location: 677195 - 678457 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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