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Cluster: WampachL_2018_SRR5575366_bin.4_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_338 398857 399552 + 1.C.82.1.1
TC WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_339 399770 400759 + 2.A.16.1.1
TC WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_340 400861 401988 + 3.A.1.11.6
pfam WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_341 402377 402907 + Ribosomal_L10
pfam WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_342 403064 403438 + Ribosomal_L12 | Ribosomal_L12_N
CAZyme WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_343 403763 405304 + GH32
TC WampachL_2018_SRR5575366_bin.4_k141_2816 WampachL_2018_SRR5575366_bin.4_k141_2816_344 406047 408044 + 4.A.1.2.12
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_338
Type: TC
Location: 398857 - 399552 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_339
Type: TC
Location: 399770 - 400759 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_340
Type: TC
Location: 400861 - 401988 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_341
Type: pfam
Location: 402377 - 402907 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_342
Type: pfam
Location: 403064 - 403438 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_343
Type: CAZyme
Location: 403763 - 405304 (+)
Gene ID: WampachL_2018_SRR5575366_bin.4_k141_2816_344
Type: TC
Location: 406047 - 408044 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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