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Cluster: WampachL_2018_SRR5575354_bin.4_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme WampachL_2018_SRR5575354_bin.4_k141_3860 WampachL_2018_SRR5575354_bin.4_k141_3860_454 470059 471087 + GT9
TC WampachL_2018_SRR5575354_bin.4_k141_3860 WampachL_2018_SRR5575354_bin.4_k141_3860_455 471037 471702 - 2.A.115.2.7
pfam WampachL_2018_SRR5575354_bin.4_k141_3860 WampachL_2018_SRR5575354_bin.4_k141_3860_456 471893 473434 + PFL-like | YjjI-like
TC WampachL_2018_SRR5575354_bin.4_k141_3860 WampachL_2018_SRR5575354_bin.4_k141_3860_457 473475 475340 - 2.A.16.2.2
TC WampachL_2018_SRR5575354_bin.4_k141_3860 WampachL_2018_SRR5575354_bin.4_k141_3860_458 475340 475645 - 9.B.21.2.1
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_3860_454
Type: CAZyme
Location: 470059 - 471087 (+)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_3860_455
Type: TC
Location: 471037 - 471702 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_3860_456
Type: pfam
Location: 471893 - 473434 (+)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_3860_457
Type: TC
Location: 473475 - 475340 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_3860_458
Type: TC
Location: 475340 - 475645 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
WampachL_2018_SRR5575354_bin.4_k141_3860_454 vegan > omnivore 1.51087 0.01786
WampachL_2018_SRR5575354_bin.4_k141_3860_454 vegetarian > omnivore 1.18537 0.01162
WampachL_2018_SRR5575354_bin.4_k141_3860_455 vegan > omnivore 1.48527 0.01786
WampachL_2018_SRR5575354_bin.4_k141_3860_455 vegetarian > omnivore 1.68324 0.00878

🧭 Explore Read Mapping of CGC

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