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Cluster: WampachL_2018_SRR5575354_bin.4_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC WampachL_2018_SRR5575354_bin.4_k141_3860 WampachL_2018_SRR5575354_bin.4_k141_3860_73 82131 84035 + 2.A.37.1.2
pfam WampachL_2018_SRR5575354_bin.4_k141_3860 WampachL_2018_SRR5575354_bin.4_k141_3860_74 84072 86207 - UPF0020 | THUMP | Cons_hypoth95 | Methyltrans_SAM | RlmL_1st
TC WampachL_2018_SRR5575354_bin.4_k141_3860 WampachL_2018_SRR5575354_bin.4_k141_3860_75 86499 87485 - 3.A.1.15.5
TC WampachL_2018_SRR5575354_bin.4_k141_3860 WampachL_2018_SRR5575354_bin.4_k141_3860_76 87654 88415 - 3.A.16.1.3
CAZyme WampachL_2018_SRR5575354_bin.4_k141_3860 WampachL_2018_SRR5575354_bin.4_k141_3860_77 88415 89542 - GH102
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_3860_73
Type: TC
Location: 82131 - 84035 (+)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_3860_74
Type: pfam
Location: 84072 - 86207 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_3860_75
Type: TC
Location: 86499 - 87485 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_3860_76
Type: TC
Location: 87654 - 88415 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_3860_77
Type: CAZyme
Location: 88415 - 89542 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
WampachL_2018_SRR5575354_bin.4_k141_3860_74 vegan > omnivore 1.38933 0.01786
WampachL_2018_SRR5575354_bin.4_k141_3860_74 vegetarian > omnivore 1.33094 0.01162
WampachL_2018_SRR5575354_bin.4_k141_3860_75 vegan > omnivore 1.17325 0.01786
WampachL_2018_SRR5575354_bin.4_k141_3860_76 vegan > omnivore 1.52527 0.01786
WampachL_2018_SRR5575354_bin.4_k141_3860_76 vegetarian > omnivore 1.45889 0.01162

🧭 Explore Read Mapping of CGC

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