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Cluster: WampachL_2018_SRR5575354_bin.4_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC WampachL_2018_SRR5575354_bin.4_k141_5826 WampachL_2018_SRR5575354_bin.4_k141_5826_130 130974 132248 - 2.A.1.25.3
pfam WampachL_2018_SRR5575354_bin.4_k141_5826 WampachL_2018_SRR5575354_bin.4_k141_5826_131 132327 133343 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_4 | KR | GDP_Man_Dehyd
TC WampachL_2018_SRR5575354_bin.4_k141_5826 WampachL_2018_SRR5575354_bin.4_k141_5826_132 133548 136781 + 1.B.12.5.3
NULL(UNKNOWN) WampachL_2018_SRR5575354_bin.4_k141_5826 WampachL_2018_SRR5575354_bin.4_k141_5826_133 136969 137208 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) WampachL_2018_SRR5575354_bin.4_k141_5826 WampachL_2018_SRR5575354_bin.4_k141_5826_134 137342 137572 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme WampachL_2018_SRR5575354_bin.4_k141_5826 WampachL_2018_SRR5575354_bin.4_k141_5826_135 137820 138647 - CE1
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_5826_130
Type: TC
Location: 130974 - 132248 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_5826_131
Type: pfam
Location: 132327 - 133343 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_5826_132
Type: TC
Location: 133548 - 136781 (+)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_5826_133
Type:
Location: 136969 - 137208 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_5826_134
Type:
Location: 137342 - 137572 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_5826_135
Type: CAZyme
Location: 137820 - 138647 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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