Cluster: WampachL_2018_SRR5575354_bin.4_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: WampachL_2018_SRR5575354_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | WampachL_2018_SRR5575354_bin.4_k141_4809 | WampachL_2018_SRR5575354_bin.4_k141_4809_183 | 192660 | 193790 | - | 1.B.1.3.3 |
| CAZyme | WampachL_2018_SRR5575354_bin.4_k141_4809 | WampachL_2018_SRR5575354_bin.4_k141_4809_184 | 193956 | 194909 | - | GT9 |
| TC | WampachL_2018_SRR5575354_bin.4_k141_4809 | WampachL_2018_SRR5575354_bin.4_k141_4809_185 | 194906 | 195811 | - | 2.A.7.3.58 |
| CAZyme | WampachL_2018_SRR5575354_bin.4_k141_4809 | WampachL_2018_SRR5575354_bin.4_k141_4809_186 | 195808 | 196851 | - | GT9 |
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_4809_183
Type: TC
Location: 192660 - 193790 (-)
Type: TC
Location: 192660 - 193790 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_4809_184
Type: CAZyme
Location: 193956 - 194909 (-)
Type: CAZyme
Location: 193956 - 194909 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_4809_185
Type: TC
Location: 194906 - 195811 (-)
Type: TC
Location: 194906 - 195811 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_4809_186
Type: CAZyme
Location: 195808 - 196851 (-)
Type: CAZyme
Location: 195808 - 196851 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.