Cluster: WampachL_2018_SRR5575354_bin.4_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: WampachL_2018_SRR5575354_bin.4
- CGC Family ID: CGCFAM_00036
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | WampachL_2018_SRR5575354_bin.4_k141_4809 | WampachL_2018_SRR5575354_bin.4_k141_4809_84 | 76816 | 78231 | - | 9.B.18.1.2 |
| CAZyme | WampachL_2018_SRR5575354_bin.4_k141_4809 | WampachL_2018_SRR5575354_bin.4_k141_4809_85 | 78241 | 79011 | - | GT111 |
| CAZyme | WampachL_2018_SRR5575354_bin.4_k141_4809 | WampachL_2018_SRR5575354_bin.4_k141_4809_86 | 79013 | 79942 | - | GT2 |
| pfam | WampachL_2018_SRR5575354_bin.4_k141_4809 | WampachL_2018_SRR5575354_bin.4_k141_4809_87 | 80015 | 81163 | - | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | WampachL_2018_SRR5575354_bin.4_k141_4809 | WampachL_2018_SRR5575354_bin.4_k141_4809_88 | 81177 | 82934 | - | GT2 |
| TC | WampachL_2018_SRR5575354_bin.4_k141_4809 | WampachL_2018_SRR5575354_bin.4_k141_4809_89 | 82949 | 83680 | - | 3.A.1.103.1 |
| TC | WampachL_2018_SRR5575354_bin.4_k141_4809 | WampachL_2018_SRR5575354_bin.4_k141_4809_90 | 83680 | 84471 | - | 3.A.1.103.4 |
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_4809_84
Type: TC
Location: 76816 - 78231 (-)
Type: TC
Location: 76816 - 78231 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_4809_85
Type: CAZyme
Location: 78241 - 79011 (-)
Type: CAZyme
Location: 78241 - 79011 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_4809_86
Type: CAZyme
Location: 79013 - 79942 (-)
Type: CAZyme
Location: 79013 - 79942 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_4809_87
Type: pfam
Location: 80015 - 81163 (-)
Type: pfam
Location: 80015 - 81163 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_4809_88
Type: CAZyme
Location: 81177 - 82934 (-)
Type: CAZyme
Location: 81177 - 82934 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_4809_89
Type: TC
Location: 82949 - 83680 (-)
Type: TC
Location: 82949 - 83680 (-)
Gene ID: WampachL_2018_SRR5575354_bin.4_k141_4809_90
Type: TC
Location: 83680 - 84471 (-)
Type: TC
Location: 83680 - 84471 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.