dbCAN Logo

Cluster: VatanenT_2016_SRR4408269_bin.4_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC VatanenT_2016_SRR4408269_bin.4_k119_2466 VatanenT_2016_SRR4408269_bin.4_k119_2466_1 3 1484 + 1.B.40.1.5
CAZyme VatanenT_2016_SRR4408269_bin.4_k119_2466 VatanenT_2016_SRR4408269_bin.4_k119_2466_2 1636 2472 + GT8
CAZyme VatanenT_2016_SRR4408269_bin.4_k119_2466 VatanenT_2016_SRR4408269_bin.4_k119_2466_3 2492 3466 - GT2
CAZyme VatanenT_2016_SRR4408269_bin.4_k119_2466 VatanenT_2016_SRR4408269_bin.4_k119_2466_4 3496 4623 - GT2
NULL(UNKNOWN) VatanenT_2016_SRR4408269_bin.4_k119_2466 VatanenT_2016_SRR4408269_bin.4_k119_2466_5 4685 5170 - NULL(UNKNOWN)
[View Structural Homologs]
TC VatanenT_2016_SRR4408269_bin.4_k119_2466 VatanenT_2016_SRR4408269_bin.4_k119_2466_6 5196 6605 - 1.B.76.1.8
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_2466_1
Type: TC
Location: 3 - 1484 (+)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_2466_2
Type: CAZyme
Location: 1636 - 2472 (+)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_2466_3
Type: CAZyme
Location: 2492 - 3466 (-)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_2466_4
Type: CAZyme
Location: 3496 - 4623 (-)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_2466_5
Type:
Location: 4685 - 5170 (-)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_2466_6
Type: TC
Location: 5196 - 6605 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List