Cluster: VatanenT_2016_SRR4408269_bin.4_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4408269_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4408269_bin.4_k119_27807 | VatanenT_2016_SRR4408269_bin.4_k119_27807_5 | 3693 | 5546 | - | 2.A.47.4.8 |
| pfam | VatanenT_2016_SRR4408269_bin.4_k119_27807 | VatanenT_2016_SRR4408269_bin.4_k119_27807_6 | 5582 | 6184 | - | RNase_HII |
| CAZyme | VatanenT_2016_SRR4408269_bin.4_k119_27807 | VatanenT_2016_SRR4408269_bin.4_k119_27807_7 | 6177 | 7346 | - | GT19 |
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_27807_5
Type: TC
Location: 3693 - 5546 (-)
Type: TC
Location: 3693 - 5546 (-)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_27807_6
Type: pfam
Location: 5582 - 6184 (-)
Type: pfam
Location: 5582 - 6184 (-)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_27807_7
Type: CAZyme
Location: 6177 - 7346 (-)
Type: CAZyme
Location: 6177 - 7346 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.