Cluster: VatanenT_2016_SRR4408269_bin.4_CGC22
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: VatanenT_2016_SRR4408269_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4408269_bin.4_k119_27788 | VatanenT_2016_SRR4408269_bin.4_k119_27788_10 | 8514 | 9443 | + | GT2 |
| CAZyme | VatanenT_2016_SRR4408269_bin.4_k119_27788 | VatanenT_2016_SRR4408269_bin.4_k119_27788_11 | 9445 | 10215 | + | GT111 |
| TC | VatanenT_2016_SRR4408269_bin.4_k119_27788 | VatanenT_2016_SRR4408269_bin.4_k119_27788_12 | 10226 | 11641 | + | 9.B.18.1.2 |
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_27788_10
Type: CAZyme
Location: 8514 - 9443 (+)
Type: CAZyme
Location: 8514 - 9443 (+)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_27788_11
Type: CAZyme
Location: 9445 - 10215 (+)
Type: CAZyme
Location: 9445 - 10215 (+)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_27788_12
Type: TC
Location: 10226 - 11641 (+)
Type: TC
Location: 10226 - 11641 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.