Cluster: VatanenT_2016_SRR4408269_bin.4_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4408269_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4408269_bin.4_k119_8218 | VatanenT_2016_SRR4408269_bin.4_k119_8218_41 | 36230 | 36988 | + | GH23 |
| pfam | VatanenT_2016_SRR4408269_bin.4_k119_8218 | VatanenT_2016_SRR4408269_bin.4_k119_8218_42 | 37004 | 37510 | + | DUF2859 |
| TC | VatanenT_2016_SRR4408269_bin.4_k119_8218 | VatanenT_2016_SRR4408269_bin.4_k119_8218_43 | 37507 | 39756 | + | 3.A.7.11.1 |
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_8218_41
Type: CAZyme
Location: 36230 - 36988 (+)
Type: CAZyme
Location: 36230 - 36988 (+)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_8218_42
Type: pfam
Location: 37004 - 37510 (+)
Type: pfam
Location: 37004 - 37510 (+)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_8218_43
Type: TC
Location: 37507 - 39756 (+)
Type: TC
Location: 37507 - 39756 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.