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Cluster: VatanenT_2016_SRR4408269_bin.4_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme VatanenT_2016_SRR4408269_bin.4_k119_693 VatanenT_2016_SRR4408269_bin.4_k119_693_6 6356 7366 + GH177
TC VatanenT_2016_SRR4408269_bin.4_k119_693 VatanenT_2016_SRR4408269_bin.4_k119_693_7 7663 8616 - 3.A.1.2.15
TC VatanenT_2016_SRR4408269_bin.4_k119_693 VatanenT_2016_SRR4408269_bin.4_k119_693_8 8672 10183 - 3.A.1.2.20
TC VatanenT_2016_SRR4408269_bin.4_k119_693 VatanenT_2016_SRR4408269_bin.4_k119_693_9 10244 11176 - 3.A.1.2.1
TC VatanenT_2016_SRR4408269_bin.4_k119_693 VatanenT_2016_SRR4408269_bin.4_k119_693_10 11255 12193 - 3.A.1.2.14
CAZyme VatanenT_2016_SRR4408269_bin.4_k119_693 VatanenT_2016_SRR4408269_bin.4_k119_693_11 12464 13603 - GH179
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_693_6
Type: CAZyme
Location: 6356 - 7366 (+)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_693_7
Type: TC
Location: 7663 - 8616 (-)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_693_8
Type: TC
Location: 8672 - 10183 (-)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_693_9
Type: TC
Location: 10244 - 11176 (-)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_693_10
Type: TC
Location: 11255 - 12193 (-)
Gene ID: VatanenT_2016_SRR4408269_bin.4_k119_693_11
Type: CAZyme
Location: 12464 - 13603 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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