Cluster: VatanenT_2016_SRR4408211_bin.5_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4408211_bin.5
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4408211_bin.5_k119_14584 | VatanenT_2016_SRR4408211_bin.5_k119_14584_18 | 14274 | 15230 | - | 9.B.10.1.1 |
| peptidase | VatanenT_2016_SRR4408211_bin.5_k119_14584 | VatanenT_2016_SRR4408211_bin.5_k119_14584_19 | 15289 | 16455 | - | M20.UPD |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_14584 | VatanenT_2016_SRR4408211_bin.5_k119_14584_20 | 16505 | 17353 | - | 3.A.1.3.27 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_14584 | VatanenT_2016_SRR4408211_bin.5_k119_14584_21 | 17369 | 18103 | - | 3.A.1.3.15 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_14584 | VatanenT_2016_SRR4408211_bin.5_k119_14584_22 | 18096 | 18800 | - | 3.A.1.3.15 |
| CAZyme | VatanenT_2016_SRR4408211_bin.5_k119_14584 | VatanenT_2016_SRR4408211_bin.5_k119_14584_23 | 19347 | 22007 | - | CE1 | CE1 |
| TF | VatanenT_2016_SRR4408211_bin.5_k119_14584 | VatanenT_2016_SRR4408211_bin.5_k119_14584_24 | 22148 | 22948 | - | HTH_6 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_14584 | VatanenT_2016_SRR4408211_bin.5_k119_14584_25 | 23338 | 24795 | + | 3.A.1.121.5 |
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14584_18
Type: TC
Location: 14274 - 15230 (-)
Type: TC
Location: 14274 - 15230 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14584_19
Type: peptidase
Location: 15289 - 16455 (-)
Type: peptidase
Location: 15289 - 16455 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14584_20
Type: TC
Location: 16505 - 17353 (-)
Type: TC
Location: 16505 - 17353 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14584_21
Type: TC
Location: 17369 - 18103 (-)
Type: TC
Location: 17369 - 18103 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14584_22
Type: TC
Location: 18096 - 18800 (-)
Type: TC
Location: 18096 - 18800 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14584_23
Type: CAZyme
Location: 19347 - 22007 (-)
Type: CAZyme
Location: 19347 - 22007 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14584_24
Type: TF
Location: 22148 - 22948 (-)
Type: TF
Location: 22148 - 22948 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14584_25
Type: TC
Location: 23338 - 24795 (+)
Type: TC
Location: 23338 - 24795 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp018365815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.