Cluster: VatanenT_2016_SRR4408211_bin.5_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4408211_bin.5
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4408211_bin.5_k119_27636 | VatanenT_2016_SRR4408211_bin.5_k119_27636_2 | 828 | 2243 | - | GH1 |
| pfam | VatanenT_2016_SRR4408211_bin.5_k119_27636 | VatanenT_2016_SRR4408211_bin.5_k119_27636_3 | 2348 | 3115 | - | S6PP | Hydrolase_3 |
| pfam | VatanenT_2016_SRR4408211_bin.5_k119_27636 | VatanenT_2016_SRR4408211_bin.5_k119_27636_4 | 3219 | 4040 | + | ATP_bind_3 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_27636 | VatanenT_2016_SRR4408211_bin.5_k119_27636_5 | 4180 | 4752 | - | 2.A.88.5.1 |
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_27636_2
Type: CAZyme
Location: 828 - 2243 (-)
Type: CAZyme
Location: 828 - 2243 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_27636_3
Type: pfam
Location: 2348 - 3115 (-)
Type: pfam
Location: 2348 - 3115 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_27636_4
Type: pfam
Location: 3219 - 4040 (+)
Type: pfam
Location: 3219 - 4040 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_27636_5
Type: TC
Location: 4180 - 4752 (-)
Type: TC
Location: 4180 - 4752 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp018365815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| VatanenT_2016_SRR4408211_bin.5_k119_27636_2 | vegan > omnivore | 3.66915 | 0.01188 |