Cluster: VatanenT_2016_SRR4408211_bin.5_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4408211_bin.5
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4408211_bin.5_k119_27160 | VatanenT_2016_SRR4408211_bin.5_k119_27160_1 | 1 | 498 | + | 3.A.1.122.14 |
| pfam | VatanenT_2016_SRR4408211_bin.5_k119_27160 | VatanenT_2016_SRR4408211_bin.5_k119_27160_2 | 522 | 2027 | + | ABC_tran |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_27160 | VatanenT_2016_SRR4408211_bin.5_k119_27160_3 | 2029 | 3618 | + | 3.A.1.201.23 |
| pfam | VatanenT_2016_SRR4408211_bin.5_k119_27160 | VatanenT_2016_SRR4408211_bin.5_k119_27160_4 | 3713 | 4159 | + | Nuc_deoxyrib_tr | Nuc_deoxyri_tr2 |
| CAZyme | VatanenT_2016_SRR4408211_bin.5_k119_27160 | VatanenT_2016_SRR4408211_bin.5_k119_27160_5 | 4218 | 5048 | - | CE1 |
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_27160_1
Type: TC
Location: 1 - 498 (+)
Type: TC
Location: 1 - 498 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_27160_2
Type: pfam
Location: 522 - 2027 (+)
Type: pfam
Location: 522 - 2027 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_27160_3
Type: TC
Location: 2029 - 3618 (+)
Type: TC
Location: 2029 - 3618 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_27160_4
Type: pfam
Location: 3713 - 4159 (+)
Type: pfam
Location: 3713 - 4159 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_27160_5
Type: CAZyme
Location: 4218 - 5048 (-)
Type: CAZyme
Location: 4218 - 5048 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp018365815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.