Cluster: VatanenT_2016_SRR4408211_bin.5_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4408211_bin.5
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4408211_bin.5_k119_26059 | VatanenT_2016_SRR4408211_bin.5_k119_26059_3 | 2417 | 3391 | + | 9.B.146.1.6 |
| pfam | VatanenT_2016_SRR4408211_bin.5_k119_26059 | VatanenT_2016_SRR4408211_bin.5_k119_26059_4 | 3393 | 4727 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_26059 | VatanenT_2016_SRR4408211_bin.5_k119_26059_5 | 4781 | 5860 | + | 2.A.103.1.3 |
| CAZyme | VatanenT_2016_SRR4408211_bin.5_k119_26059 | VatanenT_2016_SRR4408211_bin.5_k119_26059_6 | 5895 | 6986 | + | GT28 |
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_26059_3
Type: TC
Location: 2417 - 3391 (+)
Type: TC
Location: 2417 - 3391 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_26059_4
Type: pfam
Location: 3393 - 4727 (+)
Type: pfam
Location: 3393 - 4727 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_26059_5
Type: TC
Location: 4781 - 5860 (+)
Type: TC
Location: 4781 - 5860 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_26059_6
Type: CAZyme
Location: 5895 - 6986 (+)
Type: CAZyme
Location: 5895 - 6986 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp018365815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.