Cluster: VatanenT_2016_SRR4408211_bin.5_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: VatanenT_2016_SRR4408211_bin.5
- CGC Family ID: CGCFAM_00605
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4408211_bin.5_k119_18241 | VatanenT_2016_SRR4408211_bin.5_k119_18241_2 | 365 | 2098 | + | 3.A.1.106.12 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_18241 | VatanenT_2016_SRR4408211_bin.5_k119_18241_3 | 2091 | 3746 | + | 3.A.1.21.1 |
| pfam | VatanenT_2016_SRR4408211_bin.5_k119_18241 | VatanenT_2016_SRR4408211_bin.5_k119_18241_4 | 3743 | 4051 | + | YgbA_NO |
| CAZyme | VatanenT_2016_SRR4408211_bin.5_k119_18241 | VatanenT_2016_SRR4408211_bin.5_k119_18241_5 | 4139 | 5611 | + | GH1 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_18241 | VatanenT_2016_SRR4408211_bin.5_k119_18241_6 | 6162 | 8030 | - | 3.A.1.135.5 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_18241 | VatanenT_2016_SRR4408211_bin.5_k119_18241_7 | 8020 | 9756 | - | 3.A.1.135.5 |
| TF | VatanenT_2016_SRR4408211_bin.5_k119_18241 | VatanenT_2016_SRR4408211_bin.5_k119_18241_8 | 9782 | 10210 | - | MarR |
| CAZyme | VatanenT_2016_SRR4408211_bin.5_k119_18241 | VatanenT_2016_SRR4408211_bin.5_k119_18241_9 | 10458 | 11912 | + | GH1 |
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_18241_2
Type: TC
Location: 365 - 2098 (+)
Type: TC
Location: 365 - 2098 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_18241_3
Type: TC
Location: 2091 - 3746 (+)
Type: TC
Location: 2091 - 3746 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_18241_4
Type: pfam
Location: 3743 - 4051 (+)
Type: pfam
Location: 3743 - 4051 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_18241_5
Type: CAZyme
Location: 4139 - 5611 (+)
Type: CAZyme
Location: 4139 - 5611 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_18241_6
Type: TC
Location: 6162 - 8030 (-)
Type: TC
Location: 6162 - 8030 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_18241_7
Type: TC
Location: 8020 - 9756 (-)
Type: TC
Location: 8020 - 9756 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_18241_8
Type: TF
Location: 9782 - 10210 (-)
Type: TF
Location: 9782 - 10210 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_18241_9
Type: CAZyme
Location: 10458 - 11912 (+)
Type: CAZyme
Location: 10458 - 11912 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp018365815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.