Cluster: VatanenT_2016_SRR4408211_bin.5_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: VatanenT_2016_SRR4408211_bin.5
- CGC Family ID: CGCFAM_00042
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4408211_bin.5_k119_17209 | VatanenT_2016_SRR4408211_bin.5_k119_17209_2 | 192 | 506 | + | 4.A.3.2.6 |
| NULL(UNKNOWN) | VatanenT_2016_SRR4408211_bin.5_k119_17209 | VatanenT_2016_SRR4408211_bin.5_k119_17209_3 | 588 | 1022 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | VatanenT_2016_SRR4408211_bin.5_k119_17209 | VatanenT_2016_SRR4408211_bin.5_k119_17209_4 | 1215 | 2054 | + | DegV | FakA-like_C |
| CAZyme | VatanenT_2016_SRR4408211_bin.5_k119_17209 | VatanenT_2016_SRR4408211_bin.5_k119_17209_5 | 2129 | 3574 | - | GH1 |
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_17209_2
Type: TC
Location: 192 - 506 (+)
Type: TC
Location: 192 - 506 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_17209_3
Type:
Location: 588 - 1022 (-)
Type:
Location: 588 - 1022 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_17209_4
Type: pfam
Location: 1215 - 2054 (+)
Type: pfam
Location: 1215 - 2054 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_17209_5
Type: CAZyme
Location: 2129 - 3574 (-)
Type: CAZyme
Location: 2129 - 3574 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp018365815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.