Cluster: VatanenT_2016_SRR4408211_bin.5_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4408211_bin.5
- CGC Family ID: CGCFAM_06030
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4408211_bin.5_k119_16852 | VatanenT_2016_SRR4408211_bin.5_k119_16852_7 | 7799 | 8818 | + | 3.A.1.24.2 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_16852 | VatanenT_2016_SRR4408211_bin.5_k119_16852_8 | 8819 | 9472 | + | 3.A.1.24.2 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_16852 | VatanenT_2016_SRR4408211_bin.5_k119_16852_9 | 9487 | 10305 | + | 3.A.1.24.2 |
| pfam | VatanenT_2016_SRR4408211_bin.5_k119_16852 | VatanenT_2016_SRR4408211_bin.5_k119_16852_10 | 10366 | 10824 | - | AhpC-TSA | Redoxin |
| CAZyme | VatanenT_2016_SRR4408211_bin.5_k119_16852 | VatanenT_2016_SRR4408211_bin.5_k119_16852_11 | 11038 | 12432 | + | CE4 |
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_16852_7
Type: TC
Location: 7799 - 8818 (+)
Type: TC
Location: 7799 - 8818 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_16852_8
Type: TC
Location: 8819 - 9472 (+)
Type: TC
Location: 8819 - 9472 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_16852_9
Type: TC
Location: 9487 - 10305 (+)
Type: TC
Location: 9487 - 10305 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_16852_10
Type: pfam
Location: 10366 - 10824 (-)
Type: pfam
Location: 10366 - 10824 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_16852_11
Type: CAZyme
Location: 11038 - 12432 (+)
Type: CAZyme
Location: 11038 - 12432 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp018365815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.