Cluster: VatanenT_2016_SRR4408211_bin.5_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: VatanenT_2016_SRR4408211_bin.5
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4408211_bin.5_k119_14842 | VatanenT_2016_SRR4408211_bin.5_k119_14842_1 | 1 | 1296 | - | 3.A.1.135.7 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_14842 | VatanenT_2016_SRR4408211_bin.5_k119_14842_2 | 1289 | 3019 | - | 3.A.1.135.7 |
| TF | VatanenT_2016_SRR4408211_bin.5_k119_14842 | VatanenT_2016_SRR4408211_bin.5_k119_14842_3 | 3126 | 3932 | + | MerR |
| CAZyme | VatanenT_2016_SRR4408211_bin.5_k119_14842 | VatanenT_2016_SRR4408211_bin.5_k119_14842_4 | 4071 | 6104 | - | GH29 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_14842 | VatanenT_2016_SRR4408211_bin.5_k119_14842_5 | 6479 | 7768 | + | 4.A.3.2.2 |
| pfam | VatanenT_2016_SRR4408211_bin.5_k119_14842 | VatanenT_2016_SRR4408211_bin.5_k119_14842_6 | 7868 | 8194 | - | MazG |
| TF | VatanenT_2016_SRR4408211_bin.5_k119_14842 | VatanenT_2016_SRR4408211_bin.5_k119_14842_7 | 8221 | 9066 | - | HTH_6 |
| CAZyme | VatanenT_2016_SRR4408211_bin.5_k119_14842 | VatanenT_2016_SRR4408211_bin.5_k119_14842_8 | 9243 | 10613 | + | GH1 |
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14842_1
Type: TC
Location: 1 - 1296 (-)
Type: TC
Location: 1 - 1296 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14842_2
Type: TC
Location: 1289 - 3019 (-)
Type: TC
Location: 1289 - 3019 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14842_3
Type: TF
Location: 3126 - 3932 (+)
Type: TF
Location: 3126 - 3932 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14842_4
Type: CAZyme
Location: 4071 - 6104 (-)
Type: CAZyme
Location: 4071 - 6104 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14842_5
Type: TC
Location: 6479 - 7768 (+)
Type: TC
Location: 6479 - 7768 (+)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14842_6
Type: pfam
Location: 7868 - 8194 (-)
Type: pfam
Location: 7868 - 8194 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14842_7
Type: TF
Location: 8221 - 9066 (-)
Type: TF
Location: 8221 - 9066 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_14842_8
Type: CAZyme
Location: 9243 - 10613 (+)
Type: CAZyme
Location: 9243 - 10613 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp018365815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.