Cluster: VatanenT_2016_SRR4305271_bin.2_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4305271_bin.2
- CGC Family ID: CGCFAM_10038
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4305271_bin.2_k119_6472 | VatanenT_2016_SRR4305271_bin.2_k119_6472_1 | 171 | 2006 | + | 3.A.16.1.2 |
| TF | VatanenT_2016_SRR4305271_bin.2_k119_6472 | VatanenT_2016_SRR4305271_bin.2_k119_6472_2 | 2025 | 2483 | + | MarR |
| CAZyme | VatanenT_2016_SRR4305271_bin.2_k119_6472 | VatanenT_2016_SRR4305271_bin.2_k119_6472_3 | 2487 | 3329 | + | GT8 |
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_6472_1
Type: TC
Location: 171 - 2006 (+)
Type: TC
Location: 171 - 2006 (+)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_6472_2
Type: TF
Location: 2025 - 2483 (+)
Type: TF
Location: 2025 - 2483 (+)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_6472_3
Type: CAZyme
Location: 2487 - 3329 (+)
Type: CAZyme
Location: 2487 - 3329 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Sedimentibacteraceae
Genus
Sedimentibacter
Species
Sedimentibacter sp003457065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.