Cluster: VatanenT_2016_SRR4305271_bin.2_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4305271_bin.2
- CGC Family ID: CGCFAM_00570
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4305271_bin.2_k119_1281 | VatanenT_2016_SRR4305271_bin.2_k119_1281_6 | 5963 | 6478 | - | 9.B.156.3.1 |
| TC | VatanenT_2016_SRR4305271_bin.2_k119_1281 | VatanenT_2016_SRR4305271_bin.2_k119_1281_7 | 6478 | 7053 | - | 9.B.156.3.1 |
| TC | VatanenT_2016_SRR4305271_bin.2_k119_1281 | VatanenT_2016_SRR4305271_bin.2_k119_1281_8 | 7247 | 8509 | - | 9.A.40.2.2 |
| CAZyme | VatanenT_2016_SRR4305271_bin.2_k119_1281 | VatanenT_2016_SRR4305271_bin.2_k119_1281_9 | 8802 | 10058 | + | GT2 |
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_1281_6
Type: TC
Location: 5963 - 6478 (-)
Type: TC
Location: 5963 - 6478 (-)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_1281_7
Type: TC
Location: 6478 - 7053 (-)
Type: TC
Location: 6478 - 7053 (-)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_1281_8
Type: TC
Location: 7247 - 8509 (-)
Type: TC
Location: 7247 - 8509 (-)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_1281_9
Type: CAZyme
Location: 8802 - 10058 (+)
Type: CAZyme
Location: 8802 - 10058 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Sedimentibacteraceae
Genus
Sedimentibacter
Species
Sedimentibacter sp003457065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.