Cluster: VatanenT_2016_SRR4305271_bin.2_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4305271_bin.2
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305271_bin.2_k119_16439 | VatanenT_2016_SRR4305271_bin.2_k119_16439_27 | 32523 | 33794 | + | GH18 |
| STP | VatanenT_2016_SRR4305271_bin.2_k119_16439 | VatanenT_2016_SRR4305271_bin.2_k119_16439_28 | 33956 | 35239 | + | Aminotran_1_2 |
| TC | VatanenT_2016_SRR4305271_bin.2_k119_16439 | VatanenT_2016_SRR4305271_bin.2_k119_16439_29 | 35248 | 36573 | - | 2.A.35.1.1 |
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_16439_27
Type: CAZyme
Location: 32523 - 33794 (+)
Type: CAZyme
Location: 32523 - 33794 (+)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_16439_28
Type: STP
Location: 33956 - 35239 (+)
Type: STP
Location: 33956 - 35239 (+)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_16439_29
Type: TC
Location: 35248 - 36573 (-)
Type: TC
Location: 35248 - 36573 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Sedimentibacteraceae
Genus
Sedimentibacter
Species
Sedimentibacter sp003457065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.