Cluster: VatanenT_2016_SRR4305271_bin.2_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4305271_bin.2
- CGC Family ID: CGCFAM_06359
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305271_bin.2_k119_11844 | VatanenT_2016_SRR4305271_bin.2_k119_11844_3 | 1873 | 2634 | + | CBM50 |
| STP | VatanenT_2016_SRR4305271_bin.2_k119_11844 | VatanenT_2016_SRR4305271_bin.2_k119_11844_4 | 2844 | 3494 | + | TetR_N |
| pfam | VatanenT_2016_SRR4305271_bin.2_k119_11844 | VatanenT_2016_SRR4305271_bin.2_k119_11844_5 | 3589 | 4824 | + | MFS_3 | MFS_1 | MFS_1_like |
| TC | VatanenT_2016_SRR4305271_bin.2_k119_11844 | VatanenT_2016_SRR4305271_bin.2_k119_11844_6 | 4887 | 5618 | + | 3.A.1.131.1 |
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_11844_3
Type: CAZyme
Location: 1873 - 2634 (+)
Type: CAZyme
Location: 1873 - 2634 (+)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_11844_4
Type: STP
Location: 2844 - 3494 (+)
Type: STP
Location: 2844 - 3494 (+)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_11844_5
Type: pfam
Location: 3589 - 4824 (+)
Type: pfam
Location: 3589 - 4824 (+)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_11844_6
Type: TC
Location: 4887 - 5618 (+)
Type: TC
Location: 4887 - 5618 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Sedimentibacteraceae
Genus
Sedimentibacter
Species
Sedimentibacter sp003457065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.