Cluster: VatanenT_2016_SRR4305271_bin.2_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: VatanenT_2016_SRR4305271_bin.2
- CGC Family ID: CGCFAM_00064
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4305271_bin.2_k119_212 | VatanenT_2016_SRR4305271_bin.2_k119_212_1 | 2 | 2692 | - | 9.B.144.1.5 |
| CAZyme | VatanenT_2016_SRR4305271_bin.2_k119_212 | VatanenT_2016_SRR4305271_bin.2_k119_212_2 | 2784 | 3845 | - | GT4 |
| CAZyme | VatanenT_2016_SRR4305271_bin.2_k119_212 | VatanenT_2016_SRR4305271_bin.2_k119_212_3 | 3865 | 7119 | - | GT2 |
| TC | VatanenT_2016_SRR4305271_bin.2_k119_212 | VatanenT_2016_SRR4305271_bin.2_k119_212_4 | 7157 | 8467 | - | 3.A.1.103.6 |
| TC | VatanenT_2016_SRR4305271_bin.2_k119_212 | VatanenT_2016_SRR4305271_bin.2_k119_212_5 | 8478 | 8807 | - | 3.A.1.104.1 |
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_212_1
Type: TC
Location: 2 - 2692 (-)
Type: TC
Location: 2 - 2692 (-)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_212_2
Type: CAZyme
Location: 2784 - 3845 (-)
Type: CAZyme
Location: 2784 - 3845 (-)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_212_3
Type: CAZyme
Location: 3865 - 7119 (-)
Type: CAZyme
Location: 3865 - 7119 (-)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_212_4
Type: TC
Location: 7157 - 8467 (-)
Type: TC
Location: 7157 - 8467 (-)
Gene ID: VatanenT_2016_SRR4305271_bin.2_k119_212_5
Type: TC
Location: 8478 - 8807 (-)
Type: TC
Location: 8478 - 8807 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Sedimentibacteraceae
Genus
Sedimentibacter
Species
Sedimentibacter sp003457065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.