Cluster: VatanenT_2016_SRR4305227_bin.9_CGC9
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4305227_bin.9
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_59 | 68594 | 69988 | + | 9.B.18.1.1 |
| peptidase | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_60 | 70250 | 71404 | + | S09.UPW |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_61 | 71550 | 72656 | + | 3.A.1.2.3 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_62 | 72717 | 74270 | + | 3.A.1.2.3 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_63 | 74267 | 75271 | + | 3.A.1.2.3 |
| STP | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_64 | 75371 | 76336 | + | Peripla_BP_1 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_65 | 76326 | 77852 | + | 8.A.59.2.1 |
| TF | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_66 | 77888 | 79444 | + | HTH_AraC | HTH_AraC |
| STP | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_67 | 79576 | 79833 | - | PTS-HPr |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_68 | 79850 | 80170 | - | 4.A.3.2.6 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_69 | 80190 | 81548 | - | 4.A.3.2.3 |
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_70 | 81552 | 82967 | - | GH1 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_6610 | VatanenT_2016_SRR4305227_bin.9_k119_6610_71 | 82960 | 83292 | - | 4.A.3.2.4 |
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_59
Type: TC
Location: 68594 - 69988 (+)
Type: TC
Location: 68594 - 69988 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_60
Type: peptidase
Location: 70250 - 71404 (+)
Type: peptidase
Location: 70250 - 71404 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_61
Type: TC
Location: 71550 - 72656 (+)
Type: TC
Location: 71550 - 72656 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_62
Type: TC
Location: 72717 - 74270 (+)
Type: TC
Location: 72717 - 74270 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_63
Type: TC
Location: 74267 - 75271 (+)
Type: TC
Location: 74267 - 75271 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_64
Type: STP
Location: 75371 - 76336 (+)
Type: STP
Location: 75371 - 76336 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_65
Type: TC
Location: 76326 - 77852 (+)
Type: TC
Location: 76326 - 77852 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_66
Type: TF
Location: 77888 - 79444 (+)
Type: TF
Location: 77888 - 79444 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_67
Type: STP
Location: 79576 - 79833 (-)
Type: STP
Location: 79576 - 79833 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_68
Type: TC
Location: 79850 - 80170 (-)
Type: TC
Location: 79850 - 80170 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_69
Type: TC
Location: 80190 - 81548 (-)
Type: TC
Location: 80190 - 81548 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_70
Type: CAZyme
Location: 81552 - 82967 (-)
Type: CAZyme
Location: 81552 - 82967 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_6610_71
Type: TC
Location: 82960 - 83292 (-)
Type: TC
Location: 82960 - 83292 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproiciproducens
Species
Caproiciproducens sp900546895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.