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Cluster: VatanenT_2016_SRR4305227_bin.9_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme VatanenT_2016_SRR4305227_bin.9_k119_21138 VatanenT_2016_SRR4305227_bin.9_k119_21138_140 125601 127313 - CBM50
pfam VatanenT_2016_SRR4305227_bin.9_k119_21138 VatanenT_2016_SRR4305227_bin.9_k119_21138_141 127445 127903 - LuxS
pfam VatanenT_2016_SRR4305227_bin.9_k119_21138 VatanenT_2016_SRR4305227_bin.9_k119_21138_142 127918 128808 - Zn_dep_PLPC
TC VatanenT_2016_SRR4305227_bin.9_k119_21138 VatanenT_2016_SRR4305227_bin.9_k119_21138_143 128885 129619 - 3.A.1.3.25
TC VatanenT_2016_SRR4305227_bin.9_k119_21138 VatanenT_2016_SRR4305227_bin.9_k119_21138_144 129606 130340 - 3.A.1.3.20
TC VatanenT_2016_SRR4305227_bin.9_k119_21138 VatanenT_2016_SRR4305227_bin.9_k119_21138_145 130420 131262 - 3.A.1.3.15
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_21138_140
Type: CAZyme
Location: 125601 - 127313 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_21138_141
Type: pfam
Location: 127445 - 127903 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_21138_142
Type: pfam
Location: 127918 - 128808 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_21138_143
Type: TC
Location: 128885 - 129619 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_21138_144
Type: TC
Location: 129606 - 130340 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_21138_145
Type: TC
Location: 130420 - 131262 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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