Cluster: VatanenT_2016_SRR4305227_bin.9_CGC32
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: VatanenT_2016_SRR4305227_bin.9
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_18960 | VatanenT_2016_SRR4305227_bin.9_k119_18960_129 | 121418 | 123850 | - | GH94 |
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_18960 | VatanenT_2016_SRR4305227_bin.9_k119_18960_130 | 123877 | 129984 | - | GT84 |
| STP | VatanenT_2016_SRR4305227_bin.9_k119_18960 | VatanenT_2016_SRR4305227_bin.9_k119_18960_131 | 130299 | 131906 | - | TetR_N |
| pfam | VatanenT_2016_SRR4305227_bin.9_k119_18960 | VatanenT_2016_SRR4305227_bin.9_k119_18960_132 | 131943 | 132536 | - | Cytidylate_kin2 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_18960 | VatanenT_2016_SRR4305227_bin.9_k119_18960_133 | 132589 | 133329 | - | 3.A.1.3.25 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_18960 | VatanenT_2016_SRR4305227_bin.9_k119_18960_134 | 133343 | 134011 | - | 3.A.1.3.2 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_18960 | VatanenT_2016_SRR4305227_bin.9_k119_18960_135 | 134158 | 135039 | - | 3.A.1.3.27 |
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18960_129
Type: CAZyme
Location: 121418 - 123850 (-)
Type: CAZyme
Location: 121418 - 123850 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18960_130
Type: CAZyme
Location: 123877 - 129984 (-)
Type: CAZyme
Location: 123877 - 129984 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18960_131
Type: STP
Location: 130299 - 131906 (-)
Type: STP
Location: 130299 - 131906 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18960_132
Type: pfam
Location: 131943 - 132536 (-)
Type: pfam
Location: 131943 - 132536 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18960_133
Type: TC
Location: 132589 - 133329 (-)
Type: TC
Location: 132589 - 133329 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18960_134
Type: TC
Location: 133343 - 134011 (-)
Type: TC
Location: 133343 - 134011 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18960_135
Type: TC
Location: 134158 - 135039 (-)
Type: TC
Location: 134158 - 135039 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproiciproducens
Species
Caproiciproducens sp900546895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.