Cluster: VatanenT_2016_SRR4305227_bin.9_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4305227_bin.9
- CGC Family ID: CGCFAM_01118
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_18960 | VatanenT_2016_SRR4305227_bin.9_k119_18960_28 | 25677 | 26582 | - | GH25 |
| NULL(UNKNOWN) | VatanenT_2016_SRR4305227_bin.9_k119_18960 | VatanenT_2016_SRR4305227_bin.9_k119_18960_29 | 26701 | 26910 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | VatanenT_2016_SRR4305227_bin.9_k119_18960 | VatanenT_2016_SRR4305227_bin.9_k119_18960_30 | 26935 | 27447 | - | Macro |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_18960 | VatanenT_2016_SRR4305227_bin.9_k119_18960_31 | 27649 | 29508 | - | 3.A.1.135.5 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_18960 | VatanenT_2016_SRR4305227_bin.9_k119_18960_32 | 29508 | 31232 | - | 3.A.1.135.5 |
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18960_28
Type: CAZyme
Location: 25677 - 26582 (-)
Type: CAZyme
Location: 25677 - 26582 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18960_29
Type:
Location: 26701 - 26910 (-)
Type:
Location: 26701 - 26910 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18960_30
Type: pfam
Location: 26935 - 27447 (-)
Type: pfam
Location: 26935 - 27447 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18960_31
Type: TC
Location: 27649 - 29508 (-)
Type: TC
Location: 27649 - 29508 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18960_32
Type: TC
Location: 29508 - 31232 (-)
Type: TC
Location: 29508 - 31232 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproiciproducens
Species
Caproiciproducens sp900546895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.