Cluster: VatanenT_2016_SRR4305227_bin.9_CGC30
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4305227_bin.9
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_18812 | VatanenT_2016_SRR4305227_bin.9_k119_18812_62 | 58299 | 59378 | - | GH170 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_18812 | VatanenT_2016_SRR4305227_bin.9_k119_18812_63 | 59419 | 60753 | - | 4.A.3.2.8 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_18812 | VatanenT_2016_SRR4305227_bin.9_k119_18812_64 | 60750 | 61079 | - | 4.A.3.2.8 |
| pfam | VatanenT_2016_SRR4305227_bin.9_k119_18812 | VatanenT_2016_SRR4305227_bin.9_k119_18812_65 | 61157 | 61687 | - | GRDB |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_18812 | VatanenT_2016_SRR4305227_bin.9_k119_18812_66 | 61711 | 62037 | - | 4.A.3.2.2 |
| TF | VatanenT_2016_SRR4305227_bin.9_k119_18812 | VatanenT_2016_SRR4305227_bin.9_k119_18812_67 | 62300 | 64987 | + | TrmB |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_18812 | VatanenT_2016_SRR4305227_bin.9_k119_18812_68 | 65063 | 65329 | + | 8.A.8.1.6 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_18812 | VatanenT_2016_SRR4305227_bin.9_k119_18812_69 | 65329 | 66969 | + | 8.A.7.1.1 |
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18812_62
Type: CAZyme
Location: 58299 - 59378 (-)
Type: CAZyme
Location: 58299 - 59378 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18812_63
Type: TC
Location: 59419 - 60753 (-)
Type: TC
Location: 59419 - 60753 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18812_64
Type: TC
Location: 60750 - 61079 (-)
Type: TC
Location: 60750 - 61079 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18812_65
Type: pfam
Location: 61157 - 61687 (-)
Type: pfam
Location: 61157 - 61687 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18812_66
Type: TC
Location: 61711 - 62037 (-)
Type: TC
Location: 61711 - 62037 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18812_67
Type: TF
Location: 62300 - 64987 (+)
Type: TF
Location: 62300 - 64987 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18812_68
Type: TC
Location: 65063 - 65329 (+)
Type: TC
Location: 65063 - 65329 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_18812_69
Type: TC
Location: 65329 - 66969 (+)
Type: TC
Location: 65329 - 66969 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproiciproducens
Species
Caproiciproducens sp900546895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.