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Cluster: VatanenT_2016_SRR4305227_bin.9_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC VatanenT_2016_SRR4305227_bin.9_k119_16578 VatanenT_2016_SRR4305227_bin.9_k119_16578_152 134518 135336 + 1.A.30.1.4
TC VatanenT_2016_SRR4305227_bin.9_k119_16578 VatanenT_2016_SRR4305227_bin.9_k119_16578_153 135343 136125 + 1.A.30.1.4
pfam VatanenT_2016_SRR4305227_bin.9_k119_16578 VatanenT_2016_SRR4305227_bin.9_k119_16578_154 136399 136962 + UDG
CAZyme VatanenT_2016_SRR4305227_bin.9_k119_16578 VatanenT_2016_SRR4305227_bin.9_k119_16578_155 137015 138268 - GT4
pfam VatanenT_2016_SRR4305227_bin.9_k119_16578 VatanenT_2016_SRR4305227_bin.9_k119_16578_156 138306 139400 - Epimerase_2
CAZyme VatanenT_2016_SRR4305227_bin.9_k119_16578 VatanenT_2016_SRR4305227_bin.9_k119_16578_157 139417 140517 - GH177
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_152
Type: TC
Location: 134518 - 135336 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_153
Type: TC
Location: 135343 - 136125 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_154
Type: pfam
Location: 136399 - 136962 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_155
Type: CAZyme
Location: 137015 - 138268 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_156
Type: pfam
Location: 138306 - 139400 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_157
Type: CAZyme
Location: 139417 - 140517 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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