Cluster: VatanenT_2016_SRR4305227_bin.9_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: VatanenT_2016_SRR4305227_bin.9
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_16578 | VatanenT_2016_SRR4305227_bin.9_k119_16578_33 | 31101 | 32384 | + | GH18 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_16578 | VatanenT_2016_SRR4305227_bin.9_k119_16578_34 | 32429 | 35083 | - | 3.A.3.4.1 |
| pfam | VatanenT_2016_SRR4305227_bin.9_k119_16578 | VatanenT_2016_SRR4305227_bin.9_k119_16578_35 | 35241 | 36527 | - | Wzy_C |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_16578 | VatanenT_2016_SRR4305227_bin.9_k119_16578_36 | 36747 | 39086 | + | 3.A.3.23.2 |
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_16578 | VatanenT_2016_SRR4305227_bin.9_k119_16578_37 | 39091 | 39963 | - | CE4 |
| peptidase | VatanenT_2016_SRR4305227_bin.9_k119_16578 | VatanenT_2016_SRR4305227_bin.9_k119_16578_38 | 40059 | 40997 | - | S33.UPW |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_16578 | VatanenT_2016_SRR4305227_bin.9_k119_16578_39 | 41081 | 41767 | - | 1.C.113.1.1 |
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_33
Type: CAZyme
Location: 31101 - 32384 (+)
Type: CAZyme
Location: 31101 - 32384 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_34
Type: TC
Location: 32429 - 35083 (-)
Type: TC
Location: 32429 - 35083 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_35
Type: pfam
Location: 35241 - 36527 (-)
Type: pfam
Location: 35241 - 36527 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_36
Type: TC
Location: 36747 - 39086 (+)
Type: TC
Location: 36747 - 39086 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_37
Type: CAZyme
Location: 39091 - 39963 (-)
Type: CAZyme
Location: 39091 - 39963 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_38
Type: peptidase
Location: 40059 - 40997 (-)
Type: peptidase
Location: 40059 - 40997 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_16578_39
Type: TC
Location: 41081 - 41767 (-)
Type: TC
Location: 41081 - 41767 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproiciproducens
Species
Caproiciproducens sp900546895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.