Cluster: VatanenT_2016_SRR4305227_bin.9_CGC27
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: VatanenT_2016_SRR4305227_bin.9
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_15978 | VatanenT_2016_SRR4305227_bin.9_k119_15978_24 | 24945 | 25976 | + | GH177 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_15978 | VatanenT_2016_SRR4305227_bin.9_k119_15978_25 | 26175 | 27200 | + | 3.A.1.2.6 |
| pfam | VatanenT_2016_SRR4305227_bin.9_k119_15978 | VatanenT_2016_SRR4305227_bin.9_k119_15978_26 | 27254 | 28288 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_15978 | VatanenT_2016_SRR4305227_bin.9_k119_15978_27 | 28365 | 29870 | + | 3.A.1.2.20 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_15978 | VatanenT_2016_SRR4305227_bin.9_k119_15978_28 | 29867 | 30880 | + | 3.A.1.2.1 |
| pfam | VatanenT_2016_SRR4305227_bin.9_k119_15978 | VatanenT_2016_SRR4305227_bin.9_k119_15978_29 | 30915 | 31841 | + | AP_endonuc_2 |
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_15978 | VatanenT_2016_SRR4305227_bin.9_k119_15978_30 | 31919 | 32929 | + | GH177 |
| pfam | VatanenT_2016_SRR4305227_bin.9_k119_15978 | VatanenT_2016_SRR4305227_bin.9_k119_15978_31 | 32961 | 33737 | + | KduI |
| NULL(UNKNOWN) | VatanenT_2016_SRR4305227_bin.9_k119_15978 | VatanenT_2016_SRR4305227_bin.9_k119_15978_32 | 33647 | 33820 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_15978 | VatanenT_2016_SRR4305227_bin.9_k119_15978_33 | 34153 | 35811 | + | 1.B.52.2.1 |
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15978_24
Type: CAZyme
Location: 24945 - 25976 (+)
Type: CAZyme
Location: 24945 - 25976 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15978_25
Type: TC
Location: 26175 - 27200 (+)
Type: TC
Location: 26175 - 27200 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15978_26
Type: pfam
Location: 27254 - 28288 (+)
Type: pfam
Location: 27254 - 28288 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15978_27
Type: TC
Location: 28365 - 29870 (+)
Type: TC
Location: 28365 - 29870 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15978_28
Type: TC
Location: 29867 - 30880 (+)
Type: TC
Location: 29867 - 30880 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15978_29
Type: pfam
Location: 30915 - 31841 (+)
Type: pfam
Location: 30915 - 31841 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15978_30
Type: CAZyme
Location: 31919 - 32929 (+)
Type: CAZyme
Location: 31919 - 32929 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15978_31
Type: pfam
Location: 32961 - 33737 (+)
Type: pfam
Location: 32961 - 33737 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15978_32
Type:
Location: 33647 - 33820 (-)
Type:
Location: 33647 - 33820 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15978_33
Type: TC
Location: 34153 - 35811 (+)
Type: TC
Location: 34153 - 35811 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproiciproducens
Species
Caproiciproducens sp900546895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.