Cluster: VatanenT_2016_SRR4305227_bin.9_CGC18
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4305227_bin.9
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_94 | 103024 | 103284 | + | 8.A.8.1.1 |
| pfam | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_95 | 103434 | 104537 | - | Spore_permease |
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_96 | 104787 | 106208 | - | CBM50 | GH18 |
| STP | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_97 | 106477 | 106734 | - | PTS-HPr |
| NULL(UNKNOWN) | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_98 | 106964 | 107143 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_99 | 107469 | 109082 | + | 3.A.1.5.20 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_100 | 109220 | 110167 | + | 3.A.1.5.20 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_101 | 110184 | 111017 | + | 3.A.1.5.20 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_102 | 111032 | 112063 | + | 3.A.1.5.27 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_103 | 112023 | 112955 | + | 3.A.1.5.20 |
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_94
Type: TC
Location: 103024 - 103284 (+)
Type: TC
Location: 103024 - 103284 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_95
Type: pfam
Location: 103434 - 104537 (-)
Type: pfam
Location: 103434 - 104537 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_96
Type: CAZyme
Location: 104787 - 106208 (-)
Type: CAZyme
Location: 104787 - 106208 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_97
Type: STP
Location: 106477 - 106734 (-)
Type: STP
Location: 106477 - 106734 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_98
Type:
Location: 106964 - 107143 (+)
Type:
Location: 106964 - 107143 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_99
Type: TC
Location: 107469 - 109082 (+)
Type: TC
Location: 107469 - 109082 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_100
Type: TC
Location: 109220 - 110167 (+)
Type: TC
Location: 109220 - 110167 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_101
Type: TC
Location: 110184 - 111017 (+)
Type: TC
Location: 110184 - 111017 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_102
Type: TC
Location: 111032 - 112063 (+)
Type: TC
Location: 111032 - 112063 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_103
Type: TC
Location: 112023 - 112955 (+)
Type: TC
Location: 112023 - 112955 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproiciproducens
Species
Caproiciproducens sp900546895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.