Cluster: VatanenT_2016_SRR4305227_bin.9_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4305227_bin.9
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_32 | 35900 | 37720 | + | GT2 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_33 | 37787 | 39820 | - | 1.B.52.2.2 |
| pfam | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_34 | 40069 | 40245 | - | DUF1540 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_35 | 40333 | 41118 | - | 3.A.1.23.5 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_36 | 41127 | 41915 | - | 3.A.1.23.1 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_12268 | VatanenT_2016_SRR4305227_bin.9_k119_12268_37 | 41938 | 42936 | - | 3.A.1.23.1 |
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_32
Type: CAZyme
Location: 35900 - 37720 (+)
Type: CAZyme
Location: 35900 - 37720 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_33
Type: TC
Location: 37787 - 39820 (-)
Type: TC
Location: 37787 - 39820 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_34
Type: pfam
Location: 40069 - 40245 (-)
Type: pfam
Location: 40069 - 40245 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_35
Type: TC
Location: 40333 - 41118 (-)
Type: TC
Location: 40333 - 41118 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_36
Type: TC
Location: 41127 - 41915 (-)
Type: TC
Location: 41127 - 41915 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_12268_37
Type: TC
Location: 41938 - 42936 (-)
Type: TC
Location: 41938 - 42936 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproiciproducens
Species
Caproiciproducens sp900546895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.