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Cluster: TapiainenT_2019_SRR10527826_bin.3_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC TapiainenT_2019_SRR10527826_bin.3_k141_2610 TapiainenT_2019_SRR10527826_bin.3_k141_2610_5 4331 5098 - 3.A.1.103.1
TC TapiainenT_2019_SRR10527826_bin.3_k141_2610 TapiainenT_2019_SRR10527826_bin.3_k141_2610_6 5110 5955 - 3.A.1.103.6
pfam TapiainenT_2019_SRR10527826_bin.3_k141_2610 TapiainenT_2019_SRR10527826_bin.3_k141_2610_7 5969 7918 - DUF6020
CAZyme TapiainenT_2019_SRR10527826_bin.3_k141_2610 TapiainenT_2019_SRR10527826_bin.3_k141_2610_8 7977 8939 + GT81
CAZyme TapiainenT_2019_SRR10527826_bin.3_k141_2610 TapiainenT_2019_SRR10527826_bin.3_k141_2610_9 8945 9913 + GT2
TC TapiainenT_2019_SRR10527826_bin.3_k141_2610 TapiainenT_2019_SRR10527826_bin.3_k141_2610_10 9897 12305 + 9.B.144.1.5
Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_2610_5
Type: TC
Location: 4331 - 5098 (-)
Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_2610_6
Type: TC
Location: 5110 - 5955 (-)
Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_2610_7
Type: pfam
Location: 5969 - 7918 (-)
Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_2610_8
Type: CAZyme
Location: 7977 - 8939 (+)
Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_2610_9
Type: CAZyme
Location: 8945 - 9913 (+)
Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_2610_10
Type: TC
Location: 9897 - 12305 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
TapiainenT_2019_SRR10527826_bin.3_k141_2610_9 vegan > omnivore 1.03259 0.00701

🧭 Explore Read Mapping of CGC

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