dbCAN HGM

Cluster: TapiainenT_2019_SRR10527826_bin.3_CGC19

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	TapiainenT_2019_SRR10527826_bin.3_k141_32588	TapiainenT_2019_SRR10527826_bin.3_k141_32588_3	1378	3681	+	2.A.66.4.4
pfam	TapiainenT_2019_SRR10527826_bin.3_k141_32588	TapiainenT_2019_SRR10527826_bin.3_k141_32588_4	3688	5628	+	GIY-YIG \| UVR \| UvrC_RNaseH_dom \| HHH_2 \| HHH_5 \| UvrC_RNaseH
TC	TapiainenT_2019_SRR10527826_bin.3_k141_32588	TapiainenT_2019_SRR10527826_bin.3_k141_32588_5	5994	7607	+	3.A.1.5.27
TC	TapiainenT_2019_SRR10527826_bin.3_k141_32588	TapiainenT_2019_SRR10527826_bin.3_k141_32588_6	7763	8719	+	3.A.1.5.38
TC	TapiainenT_2019_SRR10527826_bin.3_k141_32588	TapiainenT_2019_SRR10527826_bin.3_k141_32588_7	8723	10738	+	3.A.1.5.25
TC	TapiainenT_2019_SRR10527826_bin.3_k141_32588	TapiainenT_2019_SRR10527826_bin.3_k141_32588_8	10739	11566	+	3.A.1.5.27
CAZyme	TapiainenT_2019_SRR10527826_bin.3_k141_32588	TapiainenT_2019_SRR10527826_bin.3_k141_32588_9	11698	12624	+	CE7

Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_32588_3
Type: TC
Location: 1378 - 3681 (+)

Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_32588_4
Type: pfam
Location: 3688 - 5628 (+)

Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_32588_5
Type: TC
Location: 5994 - 7607 (+)

Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_32588_6
Type: TC
Location: 7763 - 8719 (+)

Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_32588_7
Type: TC
Location: 8723 - 10738 (+)

Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_32588_8
Type: TC
Location: 10739 - 11566 (+)

Gene ID: TapiainenT_2019_SRR10527826_bin.3_k141_32588_9
Type: CAZyme
Location: 11698 - 12624 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.