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Cluster: ShaoY_2019_ERR3406288_bin.2_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3406288_bin.2_k141_8677 ShaoY_2019_ERR3406288_bin.2_k141_8677_2 351 1709 - 2.A.66.1.28
pfam ShaoY_2019_ERR3406288_bin.2_k141_8677 ShaoY_2019_ERR3406288_bin.2_k141_8677_3 1729 2940 - Acetyltransf_9 | SCP2_2 | Acetyltransf_17
TC ShaoY_2019_ERR3406288_bin.2_k141_8677 ShaoY_2019_ERR3406288_bin.2_k141_8677_4 2976 4571 - 2.A.21.9.2
TF ShaoY_2019_ERR3406288_bin.2_k141_8677 ShaoY_2019_ERR3406288_bin.2_k141_8677_5 4558 5265 - Trans_reg_C
TC ShaoY_2019_ERR3406288_bin.2_k141_8677 ShaoY_2019_ERR3406288_bin.2_k141_8677_6 5255 6331 - 4.D.2.1.5
CAZyme ShaoY_2019_ERR3406288_bin.2_k141_8677 ShaoY_2019_ERR3406288_bin.2_k141_8677_7 6309 7013 - CE4
CAZyme ShaoY_2019_ERR3406288_bin.2_k141_8677 ShaoY_2019_ERR3406288_bin.2_k141_8677_8 7004 8080 - GT28
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_8677_2
Type: TC
Location: 351 - 1709 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_8677_3
Type: pfam
Location: 1729 - 2940 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_8677_4
Type: TC
Location: 2976 - 4571 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_8677_5
Type: TF
Location: 4558 - 5265 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_8677_6
Type: TC
Location: 5255 - 6331 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_8677_7
Type: CAZyme
Location: 6309 - 7013 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_8677_8
Type: CAZyme
Location: 7004 - 8080 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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