Cluster: ShaoY_2019_ERR3406288_bin.2_CGC8
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3406288_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406288_bin.2_k141_5534 | ShaoY_2019_ERR3406288_bin.2_k141_5534_1 | 1003 | 1629 | - | 9.B.28.1.3 |
| TC | ShaoY_2019_ERR3406288_bin.2_k141_5534 | ShaoY_2019_ERR3406288_bin.2_k141_5534_2 | 1707 | 2819 | - | 3.A.1.1.26 |
| TF | ShaoY_2019_ERR3406288_bin.2_k141_5534 | ShaoY_2019_ERR3406288_bin.2_k141_5534_3 | 2857 | 3891 | - | LacI |
| CAZyme | ShaoY_2019_ERR3406288_bin.2_k141_5534 | ShaoY_2019_ERR3406288_bin.2_k141_5534_4 | 3962 | 5443 | - | GH77 |
| TC | ShaoY_2019_ERR3406288_bin.2_k141_5534 | ShaoY_2019_ERR3406288_bin.2_k141_5534_5 | 5469 | 6362 | - | 3.A.1.1.45 |
| TC | ShaoY_2019_ERR3406288_bin.2_k141_5534 | ShaoY_2019_ERR3406288_bin.2_k141_5534_6 | 6362 | 7207 | - | 3.A.1.1.45 |
| TC | ShaoY_2019_ERR3406288_bin.2_k141_5534 | ShaoY_2019_ERR3406288_bin.2_k141_5534_7 | 7392 | 8729 | - | 3.A.1.1.45 |
| CAZyme | ShaoY_2019_ERR3406288_bin.2_k141_5534 | ShaoY_2019_ERR3406288_bin.2_k141_5534_8 | 8929 | 11187 | - | GT35 |
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_5534_1
Type: TC
Location: 1003 - 1629 (-)
Type: TC
Location: 1003 - 1629 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_5534_2
Type: TC
Location: 1707 - 2819 (-)
Type: TC
Location: 1707 - 2819 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_5534_3
Type: TF
Location: 2857 - 3891 (-)
Type: TF
Location: 2857 - 3891 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_5534_4
Type: CAZyme
Location: 3962 - 5443 (-)
Type: CAZyme
Location: 3962 - 5443 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_5534_5
Type: TC
Location: 5469 - 6362 (-)
Type: TC
Location: 5469 - 6362 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_5534_6
Type: TC
Location: 6362 - 7207 (-)
Type: TC
Location: 6362 - 7207 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_5534_7
Type: TC
Location: 7392 - 8729 (-)
Type: TC
Location: 7392 - 8729 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_5534_8
Type: CAZyme
Location: 8929 - 11187 (-)
Type: CAZyme
Location: 8929 - 11187 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Terrisporobacter
Species
Terrisporobacter sp900557165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.