Cluster: ShaoY_2019_ERR3406288_bin.2_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3406288_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406288_bin.2_k141_17730 | ShaoY_2019_ERR3406288_bin.2_k141_17730_22 | 18358 | 19722 | + | 2.A.2.1.1 |
| TF | ShaoY_2019_ERR3406288_bin.2_k141_17730 | ShaoY_2019_ERR3406288_bin.2_k141_17730_23 | 19794 | 20654 | - | HTH_AraC | HTH_AraC |
| CAZyme | ShaoY_2019_ERR3406288_bin.2_k141_17730 | ShaoY_2019_ERR3406288_bin.2_k141_17730_24 | 20806 | 23022 | + | GH36 |
| STP | ShaoY_2019_ERR3406288_bin.2_k141_17730 | ShaoY_2019_ERR3406288_bin.2_k141_17730_25 | 23033 | 23986 | + | PfkB |
| CAZyme | ShaoY_2019_ERR3406288_bin.2_k141_17730 | ShaoY_2019_ERR3406288_bin.2_k141_17730_26 | 24003 | 25472 | + | GH13_18 |
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_17730_22
Type: TC
Location: 18358 - 19722 (+)
Type: TC
Location: 18358 - 19722 (+)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_17730_23
Type: TF
Location: 19794 - 20654 (-)
Type: TF
Location: 19794 - 20654 (-)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_17730_24
Type: CAZyme
Location: 20806 - 23022 (+)
Type: CAZyme
Location: 20806 - 23022 (+)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_17730_25
Type: STP
Location: 23033 - 23986 (+)
Type: STP
Location: 23033 - 23986 (+)
Gene ID: ShaoY_2019_ERR3406288_bin.2_k141_17730_26
Type: CAZyme
Location: 24003 - 25472 (+)
Type: CAZyme
Location: 24003 - 25472 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Terrisporobacter
Species
Terrisporobacter sp900557165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.