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Cluster: ShaoY_2019_ERR3406288_bin.12_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3406288_bin.12_k141_17864 ShaoY_2019_ERR3406288_bin.12_k141_17864_66 78020 79579 + 2.A.2.5.1
CAZyme ShaoY_2019_ERR3406288_bin.12_k141_17864 ShaoY_2019_ERR3406288_bin.12_k141_17864_67 79695 81290 + GH28
peptidase ShaoY_2019_ERR3406288_bin.12_k141_17864 ShaoY_2019_ERR3406288_bin.12_k141_17864_68 81395 82204 + S09.UPW
CAZyme ShaoY_2019_ERR3406288_bin.12_k141_17864 ShaoY_2019_ERR3406288_bin.12_k141_17864_69 82201 84366 + CE19 | CE8
pfam ShaoY_2019_ERR3406288_bin.12_k141_17864 ShaoY_2019_ERR3406288_bin.12_k141_17864_70 84436 85104 + Lipase_GDSL | Lipase_GDSL_2
CAZyme ShaoY_2019_ERR3406288_bin.12_k141_17864 ShaoY_2019_ERR3406288_bin.12_k141_17864_71 85212 86450 + GH105
Gene ID: ShaoY_2019_ERR3406288_bin.12_k141_17864_66
Type: TC
Location: 78020 - 79579 (+)
Gene ID: ShaoY_2019_ERR3406288_bin.12_k141_17864_67
Type: CAZyme
Location: 79695 - 81290 (+)
Gene ID: ShaoY_2019_ERR3406288_bin.12_k141_17864_68
Type: peptidase
Location: 81395 - 82204 (+)
Gene ID: ShaoY_2019_ERR3406288_bin.12_k141_17864_69
Type: CAZyme
Location: 82201 - 84366 (+)
Gene ID: ShaoY_2019_ERR3406288_bin.12_k141_17864_70
Type: pfam
Location: 84436 - 85104 (+)
Gene ID: ShaoY_2019_ERR3406288_bin.12_k141_17864_71
Type: CAZyme
Location: 85212 - 86450 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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