Cluster: ShaoY_2019_ERR3406283_bin.5_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406283_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406283_bin.5_k141_25492 | ShaoY_2019_ERR3406283_bin.5_k141_25492_122 | 136867 | 137853 | + | 9.B.146.1.6 |
| pfam | ShaoY_2019_ERR3406283_bin.5_k141_25492 | ShaoY_2019_ERR3406283_bin.5_k141_25492_123 | 137980 | 139344 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | ShaoY_2019_ERR3406283_bin.5_k141_25492 | ShaoY_2019_ERR3406283_bin.5_k141_25492_124 | 139349 | 140458 | + | GT28 |
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_25492_122
Type: TC
Location: 136867 - 137853 (+)
Type: TC
Location: 136867 - 137853 (+)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_25492_123
Type: pfam
Location: 137980 - 139344 (+)
Type: pfam
Location: 137980 - 139344 (+)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_25492_124
Type: CAZyme
Location: 139349 - 140458 (+)
Type: CAZyme
Location: 139349 - 140458 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.