Cluster: ShaoY_2019_ERR3406283_bin.5_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406283_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406283_bin.5_k141_7355 | ShaoY_2019_ERR3406283_bin.5_k141_7355_4 | 4584 | 5381 | - | 2.A.102.4.9 |
| pfam | ShaoY_2019_ERR3406283_bin.5_k141_7355 | ShaoY_2019_ERR3406283_bin.5_k141_7355_5 | 5392 | 6666 | - | Lar_N | LarA_C |
| TC | ShaoY_2019_ERR3406283_bin.5_k141_7355 | ShaoY_2019_ERR3406283_bin.5_k141_7355_6 | 7156 | 8700 | - | 2.A.49.3.3 |
| pfam | ShaoY_2019_ERR3406283_bin.5_k141_7355 | ShaoY_2019_ERR3406283_bin.5_k141_7355_7 | 8881 | 10032 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| CAZyme | ShaoY_2019_ERR3406283_bin.5_k141_7355 | ShaoY_2019_ERR3406283_bin.5_k141_7355_8 | 10174 | 11322 | - | GH3 |
| pfam | ShaoY_2019_ERR3406283_bin.5_k141_7355 | ShaoY_2019_ERR3406283_bin.5_k141_7355_9 | 11603 | 11836 | + | Fer2_BFD |
| TC | ShaoY_2019_ERR3406283_bin.5_k141_7355 | ShaoY_2019_ERR3406283_bin.5_k141_7355_10 | 12265 | 12897 | - | 9.B.149.1.11 |
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7355_4
Type: TC
Location: 4584 - 5381 (-)
Type: TC
Location: 4584 - 5381 (-)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7355_5
Type: pfam
Location: 5392 - 6666 (-)
Type: pfam
Location: 5392 - 6666 (-)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7355_6
Type: TC
Location: 7156 - 8700 (-)
Type: TC
Location: 7156 - 8700 (-)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7355_7
Type: pfam
Location: 8881 - 10032 (-)
Type: pfam
Location: 8881 - 10032 (-)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7355_8
Type: CAZyme
Location: 10174 - 11322 (-)
Type: CAZyme
Location: 10174 - 11322 (-)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7355_9
Type: pfam
Location: 11603 - 11836 (+)
Type: pfam
Location: 11603 - 11836 (+)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7355_10
Type: TC
Location: 12265 - 12897 (-)
Type: TC
Location: 12265 - 12897 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.